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SAMtools is a program for reading, manipulating and writing bioinformatics file formats. Starting in version 1.17, in the cram-size command, used to write information about how well CRAM files are compressed, a check to see if the `cram_decode_compression_header()` was missing. If the function returned an error, this could lead to a NULL pointer dereference. Exploiting this bug causes a NULL pointer dereference. Typically this will cause the program to crash. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.
samtools
SAMtools is a program for reading, manipulating and writing bioinformatics file formats. The `mpileup` command outputs DNA sequences that have been aligned against a known reference. On each output line it writes the reference position, optionally the reference DNA base at that position (obtained from a separate file) and all of the DNA bases that aligned to that position. As the output is ordered by position, reference data that is no longer needed is discarded once it has been printed out. Under certain conditions the data could be discarded too early, leading to an attempt to read from a pointer to freed memory. This bug may allow information about program state to be leaked. It may also cause a program crash through an attempt to access invalid memory. This bug is fixed in versions 1.21.1 and 1.22. There is no workaround for this issue.
samtools
In the Linux kernel, the following vulnerability has been resolved: net: dsa: clean up FDB, MDB, VLAN entries on unbind As explained in many places such as commit b117e1e8a86d ("net: dsa: delete dsa_legacy_fdb_add and dsa_legacy_fdb_del"), DSA is written given the assumption that higher layers have balanced additions/deletions. As such, it only makes sense to be extremely vocal when those assumptions are violated and the driver unbinds with entries still present. But Ido Schimmel points out a very simple situation where that is wrong: https://lore.kernel.org/netdev/ZDazSM5UsPPjQuKr@shredder/ (also briefly discussed by me in the aforementioned commit). Basically, while the bridge bypass operations are not something that DSA explicitly documents, and for the majority of DSA drivers this API simply causes them to go to promiscuous mode, that isn't the case for all drivers. Some have the necessary requirements for bridge bypass operations to do something useful - see dsa_switch_supports_uc_filtering(). Although in tools/testing/selftests/net/forwarding/local_termination.sh, we made an effort to popularize better mechanisms to manage address filters on DSA interfaces from user space - namely macvlan for unicast, and setsockopt(IP_ADD_MEMBERSHIP) - through mtools - for multicast, the fact is that 'bridge fdb add ... self static local' also exists as kernel UAPI, and might be useful to someone, even if only for a quick hack. It seems counter-productive to block that path by implementing shim .ndo_fdb_add and .ndo_fdb_del operations which just return -EOPNOTSUPP in order to prevent the ndo_dflt_fdb_add() and ndo_dflt_fdb_del() from running, although we could do that. Accepting that cleanup is necessary seems to be the only option. Especially since we appear to be coming back at this from a different angle as well. Russell King is noticing that the WARN_ON() triggers even for VLANs: https://lore.kernel.org/netdev/Z_li8Bj8bD4-BYKQ@shell.armlinux.org.uk/ What happens in the bug report above is that dsa_port_do_vlan_del() fails, then the VLAN entry lingers on, and then we warn on unbind and leak it. This is not a straight revert of the blamed commit, but we now add an informational print to the kernel log (to still have a way to see that bugs exist), and some extra comments gathered from past years' experience, to justify the logic.
linux